Gertrude01/3Class-Gel-Segmentation-Mar-2026
By Gertrude01 · ↓ 0 · ♥ 0 · Updated 2026-03-09
What's in this repo
This page lists the files in Gertrude01/3Class-Gel-Segmentation-Mar-2026, including 3class_gel_segmentation_epoch_650.onnx, 3class_gel_segmentation_epoch_650_fixed_dim_1024.onnx.
- 2 ONNX models (.onnx files)
- 225 files, including 214 .pdf, 3 .pth, 2 .onnx, 1 .md, 1 .toml, 1 .txt
- Last updated 2026-03-09
ONNX files
| File | Size | Download |
|---|---|---|
| onnx_checkpoints/3class_gel_segmentation_epoch_650.onnx | — | Download |
| onnx_checkpoints/3class_gel_segmentation_epoch_650_fixed_dim_1024.onnx | — | Download |
How to use
These ONNX files can be loaded with ONNX Runtime. To inspect a model graph, upload the file to the Netron viewer. Download links point to the original files on Hugging Face.
README
This SMP-UNet model was trained on a subset of the GelGenie training dataset (144 images). It builds upon the GelGenie-Universal-Dec-2023 model, extending it from 2-class to 3-class segmentation (background, bands, and wells).
The model was initialised from the GelGenie-Universal-Dec-2023 checkpoint and fine-tuned for 3-class segmentation from epoch 579 to epoch 650. Epoch 650 was selected as the final checkpoint.
Files (225)
.gitattributes
README.md
checkpoints/checkpoint_epoch_579.pth
checkpoints/checkpoint_epoch_600.pth
checkpoints/checkpoint_epoch_650.pth
config.toml
onnx_checkpoints/3class_gel_segmentation_epoch_650.onnx
ONNX
onnx_checkpoints/3class_gel_segmentation_epoch_650_fixed_dim_1024.onnx
ONNX
segmentation_samples/sample_epoch_580_67.pdf
segmentation_samples/sample_epoch_580_C107-3.pdf
segmentation_samples/sample_epoch_580_C53357.pdf
segmentation_samples/sample_epoch_581_67.pdf
segmentation_samples/sample_epoch_581_C107-3.pdf
segmentation_samples/sample_epoch_581_C53357.pdf
segmentation_samples/sample_epoch_582_67.pdf
segmentation_samples/sample_epoch_582_C107-3.pdf
segmentation_samples/sample_epoch_582_C53357.pdf
segmentation_samples/sample_epoch_583_67.pdf
segmentation_samples/sample_epoch_583_C107-3.pdf
segmentation_samples/sample_epoch_583_C53357.pdf
segmentation_samples/sample_epoch_584_67.pdf
segmentation_samples/sample_epoch_584_C107-3.pdf
segmentation_samples/sample_epoch_584_C53357.pdf
segmentation_samples/sample_epoch_585_67.pdf
segmentation_samples/sample_epoch_585_C107-3.pdf
segmentation_samples/sample_epoch_585_C53357.pdf
segmentation_samples/sample_epoch_586_67.pdf
segmentation_samples/sample_epoch_586_C107-3.pdf
segmentation_samples/sample_epoch_586_C53357.pdf
segmentation_samples/sample_epoch_587_67.pdf
segmentation_samples/sample_epoch_587_C107-3.pdf
segmentation_samples/sample_epoch_587_C53357.pdf
segmentation_samples/sample_epoch_588_67.pdf
segmentation_samples/sample_epoch_588_C107-3.pdf
segmentation_samples/sample_epoch_588_C53357.pdf
segmentation_samples/sample_epoch_589_67.pdf
segmentation_samples/sample_epoch_589_C107-3.pdf
segmentation_samples/sample_epoch_589_C53357.pdf
segmentation_samples/sample_epoch_590_67.pdf
segmentation_samples/sample_epoch_590_C107-3.pdf
segmentation_samples/sample_epoch_590_C53357.pdf
segmentation_samples/sample_epoch_591_67.pdf
segmentation_samples/sample_epoch_591_C107-3.pdf
segmentation_samples/sample_epoch_591_C53357.pdf
segmentation_samples/sample_epoch_592_67.pdf
segmentation_samples/sample_epoch_592_C107-3.pdf
segmentation_samples/sample_epoch_592_C53357.pdf
segmentation_samples/sample_epoch_593_67.pdf
segmentation_samples/sample_epoch_593_C107-3.pdf
segmentation_samples/sample_epoch_593_C53357.pdf
segmentation_samples/sample_epoch_594_67.pdf
segmentation_samples/sample_epoch_594_C107-3.pdf
segmentation_samples/sample_epoch_594_C53357.pdf
segmentation_samples/sample_epoch_595_67.pdf
segmentation_samples/sample_epoch_595_C107-3.pdf
segmentation_samples/sample_epoch_595_C53357.pdf
segmentation_samples/sample_epoch_596_67.pdf
segmentation_samples/sample_epoch_596_C107-3.pdf
segmentation_samples/sample_epoch_596_C53357.pdf
segmentation_samples/sample_epoch_597_67.pdf
segmentation_samples/sample_epoch_597_C107-3.pdf
segmentation_samples/sample_epoch_597_C53357.pdf
segmentation_samples/sample_epoch_598_67.pdf
segmentation_samples/sample_epoch_598_C107-3.pdf
segmentation_samples/sample_epoch_598_C53357.pdf
segmentation_samples/sample_epoch_599_67.pdf
segmentation_samples/sample_epoch_599_C107-3.pdf
segmentation_samples/sample_epoch_599_C53357.pdf
segmentation_samples/sample_epoch_600_67.pdf
segmentation_samples/sample_epoch_600_C107-3.pdf
segmentation_samples/sample_epoch_600_C53357.pdf
segmentation_samples/sample_epoch_601_67.pdf
segmentation_samples/sample_epoch_601_C107-3.pdf
segmentation_samples/sample_epoch_601_C53357.pdf
segmentation_samples/sample_epoch_602_67.pdf
segmentation_samples/sample_epoch_602_C107-3.pdf
segmentation_samples/sample_epoch_602_C53357.pdf
segmentation_samples/sample_epoch_603_67.pdf
segmentation_samples/sample_epoch_603_C107-3.pdf
segmentation_samples/sample_epoch_603_C53357.pdf
segmentation_samples/sample_epoch_604_67.pdf
segmentation_samples/sample_epoch_604_C107-3.pdf
segmentation_samples/sample_epoch_604_C53357.pdf
segmentation_samples/sample_epoch_605_67.pdf
segmentation_samples/sample_epoch_605_C107-3.pdf
segmentation_samples/sample_epoch_605_C53357.pdf
segmentation_samples/sample_epoch_606_67.pdf
segmentation_samples/sample_epoch_606_C107-3.pdf
segmentation_samples/sample_epoch_606_C53357.pdf
segmentation_samples/sample_epoch_607_67.pdf
segmentation_samples/sample_epoch_607_C107-3.pdf
segmentation_samples/sample_epoch_607_C53357.pdf
segmentation_samples/sample_epoch_608_67.pdf
segmentation_samples/sample_epoch_608_C107-3.pdf
segmentation_samples/sample_epoch_608_C53357.pdf
segmentation_samples/sample_epoch_609_67.pdf
segmentation_samples/sample_epoch_609_C107-3.pdf
segmentation_samples/sample_epoch_609_C53357.pdf
segmentation_samples/sample_epoch_610_67.pdf
segmentation_samples/sample_epoch_610_C107-3.pdf
segmentation_samples/sample_epoch_610_C53357.pdf
segmentation_samples/sample_epoch_611_67.pdf
segmentation_samples/sample_epoch_611_C107-3.pdf
segmentation_samples/sample_epoch_611_C53357.pdf
segmentation_samples/sample_epoch_612_67.pdf
segmentation_samples/sample_epoch_612_C107-3.pdf
segmentation_samples/sample_epoch_612_C53357.pdf
segmentation_samples/sample_epoch_613_67.pdf
segmentation_samples/sample_epoch_613_C107-3.pdf
segmentation_samples/sample_epoch_613_C53357.pdf
segmentation_samples/sample_epoch_614_67.pdf
segmentation_samples/sample_epoch_614_C107-3.pdf
segmentation_samples/sample_epoch_614_C53357.pdf
segmentation_samples/sample_epoch_615_67.pdf
segmentation_samples/sample_epoch_615_C107-3.pdf
segmentation_samples/sample_epoch_615_C53357.pdf
segmentation_samples/sample_epoch_616_67.pdf
segmentation_samples/sample_epoch_616_C107-3.pdf
segmentation_samples/sample_epoch_616_C53357.pdf
segmentation_samples/sample_epoch_617_67.pdf
segmentation_samples/sample_epoch_617_C107-3.pdf
segmentation_samples/sample_epoch_617_C53357.pdf
segmentation_samples/sample_epoch_618_67.pdf
segmentation_samples/sample_epoch_618_C107-3.pdf
segmentation_samples/sample_epoch_618_C53357.pdf
segmentation_samples/sample_epoch_619_67.pdf
segmentation_samples/sample_epoch_619_C107-3.pdf
segmentation_samples/sample_epoch_619_C53357.pdf
segmentation_samples/sample_epoch_620_67.pdf
segmentation_samples/sample_epoch_620_C107-3.pdf
segmentation_samples/sample_epoch_620_C53357.pdf
segmentation_samples/sample_epoch_621_67.pdf
segmentation_samples/sample_epoch_621_C107-3.pdf
segmentation_samples/sample_epoch_621_C53357.pdf
segmentation_samples/sample_epoch_622_67.pdf
segmentation_samples/sample_epoch_622_C107-3.pdf
segmentation_samples/sample_epoch_622_C53357.pdf
segmentation_samples/sample_epoch_623_67.pdf
segmentation_samples/sample_epoch_623_C107-3.pdf
segmentation_samples/sample_epoch_623_C53357.pdf
segmentation_samples/sample_epoch_624_67.pdf
segmentation_samples/sample_epoch_624_C107-3.pdf
segmentation_samples/sample_epoch_624_C53357.pdf
segmentation_samples/sample_epoch_625_67.pdf
segmentation_samples/sample_epoch_625_C107-3.pdf
segmentation_samples/sample_epoch_625_C53357.pdf
segmentation_samples/sample_epoch_626_67.pdf
segmentation_samples/sample_epoch_626_C107-3.pdf
segmentation_samples/sample_epoch_626_C53357.pdf
segmentation_samples/sample_epoch_627_67.pdf
segmentation_samples/sample_epoch_627_C107-3.pdf
segmentation_samples/sample_epoch_627_C53357.pdf
segmentation_samples/sample_epoch_628_67.pdf
segmentation_samples/sample_epoch_628_C107-3.pdf
segmentation_samples/sample_epoch_628_C53357.pdf
segmentation_samples/sample_epoch_629_67.pdf
segmentation_samples/sample_epoch_629_C107-3.pdf
segmentation_samples/sample_epoch_629_C53357.pdf
segmentation_samples/sample_epoch_630_67.pdf
segmentation_samples/sample_epoch_630_C107-3.pdf
segmentation_samples/sample_epoch_630_C53357.pdf
segmentation_samples/sample_epoch_631_67.pdf
segmentation_samples/sample_epoch_631_C107-3.pdf
segmentation_samples/sample_epoch_631_C53357.pdf
segmentation_samples/sample_epoch_632_67.pdf
segmentation_samples/sample_epoch_632_C107-3.pdf
segmentation_samples/sample_epoch_632_C53357.pdf
segmentation_samples/sample_epoch_633_67.pdf
segmentation_samples/sample_epoch_633_C107-3.pdf
segmentation_samples/sample_epoch_633_C53357.pdf
segmentation_samples/sample_epoch_634_67.pdf
segmentation_samples/sample_epoch_634_C107-3.pdf
segmentation_samples/sample_epoch_634_C53357.pdf
segmentation_samples/sample_epoch_635_67.pdf
segmentation_samples/sample_epoch_635_C107-3.pdf
segmentation_samples/sample_epoch_635_C53357.pdf
segmentation_samples/sample_epoch_636_67.pdf
segmentation_samples/sample_epoch_636_C107-3.pdf
segmentation_samples/sample_epoch_636_C53357.pdf
segmentation_samples/sample_epoch_637_67.pdf
segmentation_samples/sample_epoch_637_C107-3.pdf
segmentation_samples/sample_epoch_637_C53357.pdf
segmentation_samples/sample_epoch_638_67.pdf
segmentation_samples/sample_epoch_638_C107-3.pdf
segmentation_samples/sample_epoch_638_C53357.pdf
segmentation_samples/sample_epoch_639_67.pdf
segmentation_samples/sample_epoch_639_C107-3.pdf
segmentation_samples/sample_epoch_639_C53357.pdf
segmentation_samples/sample_epoch_640_67.pdf
segmentation_samples/sample_epoch_640_C107-3.pdf
segmentation_samples/sample_epoch_640_C53357.pdf
segmentation_samples/sample_epoch_641_67.pdf
segmentation_samples/sample_epoch_641_C107-3.pdf
segmentation_samples/sample_epoch_641_C53357.pdf
segmentation_samples/sample_epoch_642_67.pdf
segmentation_samples/sample_epoch_642_C107-3.pdf
segmentation_samples/sample_epoch_642_C53357.pdf
segmentation_samples/sample_epoch_643_67.pdf
segmentation_samples/sample_epoch_643_C107-3.pdf
segmentation_samples/sample_epoch_643_C53357.pdf
segmentation_samples/sample_epoch_644_67.pdf
segmentation_samples/sample_epoch_644_C107-3.pdf
segmentation_samples/sample_epoch_644_C53357.pdf
segmentation_samples/sample_epoch_645_67.pdf
segmentation_samples/sample_epoch_645_C107-3.pdf
segmentation_samples/sample_epoch_645_C53357.pdf
segmentation_samples/sample_epoch_646_67.pdf
segmentation_samples/sample_epoch_646_C107-3.pdf
segmentation_samples/sample_epoch_646_C53357.pdf
segmentation_samples/sample_epoch_647_67.pdf
segmentation_samples/sample_epoch_647_C107-3.pdf
segmentation_samples/sample_epoch_647_C53357.pdf
segmentation_samples/sample_epoch_648_67.pdf
segmentation_samples/sample_epoch_648_C107-3.pdf
segmentation_samples/sample_epoch_648_C53357.pdf
segmentation_samples/sample_epoch_649_67.pdf
segmentation_samples/sample_epoch_649_C107-3.pdf
segmentation_samples/sample_epoch_649_C53357.pdf
segmentation_samples/sample_epoch_650_67.pdf
segmentation_samples/sample_epoch_650_C107-3.pdf
segmentation_samples/sample_epoch_650_C53357.pdf
time_log.txt
torchscript_checkpoints/3class_gel_segmentation_epoch_650.pt
training_logs/metric_plots_resumed_from_579_20251222_120948.pdf
training_logs/training_stats_resumed_from_579_20251222_120948.csv
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